Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900841.1_cds_XP_016450864.1_45276
CDS Infomation

[gene=LOC107775629] [db_xref=GeneID:107775629] [protein=CTL-like protein DDB_G0274487] [protein_id=XP_016450864.1] [location=complement(join(60175..60432,71811..72041,73136..73369,75084..75200,75332..75556,75675..75858,76821..77290,79099..79179))] [gbkey=CDS]
Sequence

ATGAGTGATTCTCAGTTCTCTTCTCTTTCTTCCTCCTCCTACGACGGCTCCGCTTCTCCC
TCCGCCGCCGCTCCACCGCCGAATGTGGTGGGGAATGGTTCGGGTGGAGATGCTAATAGA
TCTCGACAACTGATCACTTCACAAGTTTCACGGCATTGGCGAGATGTGTTCTGGATGGGG
GTATTCATGTTGCATCTAGTATTGGTAGGTGTAGCACTTGCTGTATTGGGGTTTAACAGG
TTTAGGGAAAAGGATAGGCTCAAAATCGATAGGTTCACGAACATGTTCCTTGAGAATCAA
CCTGGTTTGACTGAGGACTTTTGGCCTTTGTATGCCGTCGCTGGAGCAGTTGGAACAGTT
CTGGCATGGGCTTGGTTGTTGTTGCTTGGATCAAGTGCTAATAGCATGATGAAGTTCTCG
GTTCACATCTTAACAACATATCTTGCTGTGATCAGTGTGTTGTGTTTCTGGCAGAAGCAA
TTTTTCTGGGGTGTTGCATTTGCTGTTGGTGCGGTATTGCAGTTTTTGTACGTAATATCA
GTTATAGACAGGCTTCCATTTACCATGTTGGTGTTACAAAGAGGTGTGAAGATGGTGTGG
AGCCTTCCTGAAGTTATGGGAGTCTCATGTGCATTCATGCTCGTCATGCTTTCATGGCTA
GTACTTTGGTCTTTTGGAGTAGCTGGTGTTGTAGCGCTTAGTATCGGTGATGGTGGACGC
TGGTGGCTTCTTGTGGTCTTCTGTGTGAGTCTGTTTTGGACTGGTGCAGTACTGTGTAAC
ATTATTCATGTAATAGTGTCGGGCATGGTATTTCTAGTTCTCATTAATGGTGGTCGGCAA
GCAGACTCAATGCCTCCCAAACCAGTGATGAGATCCTTACGCTATGCTGTTACAACCTCG
TTTGGCAGCATCTGCTATGGGTCACTTTTTACAGCTGCGATCCGGACATTACGCTGGAAG
ATTAGAGGAGTCAGATCAAAGATTGGCAAGAATGAGTGTTTGCTTTGCTGCGTCGATTTC
CTCTTTCATTTGGTTGAGACCTTAGTTCGTTTCTTCAATAAATATGCTTATGTTCAGATT
GCAGTTTATGGTAAAAACTTTAATCGCTCGGCAAGAGATGCCTGGGAGTTGTTCCAATCA
ACAGGGGTTGAAGCACTTATTGCCTATGACTGCTCAGGTGCTGTTATATTGATGGGAACT
CTTGTAGGTGGGCTGGTAGCCGGAACTTGTGCCGGAGTTTGGACAAGGATCAAGCATCCT
GACAGAGTGATGATGGTGGGTTCTACTTCCTTGTTGATGGGAATGATCTTGGTCGGACTG
GCTACAGTTGTTGTGGAAAGCGCTGTGACATCCATATATATCTGTTATGCCGAAGATCCT
GTATTAATACAAAGATGGGATGCGGAGTTTTTCAACAAGATGTCAGAGATGCTGCACCAG
CGATTACAACATAGAAGTGCGCGAGCAACTCAAGTACTGACCAGCAGCAGNCCACACACA
CACACATTTTTTTACATTCATCTCTTAGCTCCTTGTCTTCCTCTAGCATCAAATCAGAAT
ATTAGGCATCCAAGTACTCTTCCCAGTGATACACAGAAGAATCCTCAAGTTAATGCAGAT
ACACTCAGAAATGGGAGGGAATTAGAAGAAGTGCCAAAGAAGAGAAAGGATAAGCCTACA
CCTGAGGGGGAGTTGATTCCTAAGGCAACATATGAGTCAAAGAAAGATGATGCAAGTTCA
GAACCAGTGAATGCTGTAAGGCCACCACCACATTTCCCCAAAGATGGTAGAAGAGAATGA

Peptide Sequence

PEP ID

XP_016450864.1
PEP Infomation

PREDICTED: CTL-like protein DDB_G0274487 [Nicotiana tabacum]
Sequence

MSDSQFSSLSSSSYDGSASPSAAAPPPNVVGNGSGGDANRSRQLITSQVSRHWRDVFWMG
VFMLHLVLVGVALAVLGFNRFREKDRLKIDRFTNMFLENQPGLTEDFWPLYAVAGAVGTV
LAWAWLLLLGSSANSMMKFSVHILTTYLAVISVLCFWQKQFFWGVAFAVGAVLQFLYVIS
VIDRLPFTMLVLQRGVKMVWSLPEVMGVSCAFMLVMLSWLVLWSFGVAGVVALSIGDGGR
WWLLVVFCVSLFWTGAVLCNIIHVIVSGMVFLVLINGGRQADSMPPKPVMRSLRYAVTTS
FGSICYGSLFTAAIRTLRWKIRGVRSKIGKNECLLCCVDFLFHLVETLVRFFNKYAYVQI
AVYGKNFNRSARDAWELFQSTGVEALIAYDCSGAVILMGTLVGGLVAGTCAGVWTRIKHP
DRVMMVGSTSLLMGMILVGLATVVVESAVTSIYICYAEDPVLIQRWDAEFFNKMSEMLHQ
RLQHRSARATQVLTSSXPHTHTFFYIHLLAPCLPLASNQNIRHPSTLPSDTQKNPQVNAD
TLRNGRELEEVPKKRKDKPTPEGELIPKATYESKKDDASSEPVNAVRPPPHFPKDGRRE

Transcript Sequence

Gene sequence data has not been registered.